Institute for Molecular 
  Design

Molecular Dynamics Videos


GCG DNA triplex trajectory simulation

The following pictures were rendered from protien data bank files using Raster3D
Van der Waals rendering with translucent H2O (50K jpg)
Licorice rendering with translucent H2O (56K jpg)
Close up of last (88K jpg)
Licorice triplex, van der Waals translucent solvent with opaque ions (49K jpg)
Same as above, with atom sizes and colors corrected for viewability (49K jpg)
Same as above, with the water copied to all sides (88K jpg)
Another frame from above (27K jpg)

Some videos in Apple's QuickTime format: Movies
Some of these pictures were used in an arcticle in Cornell University's Forefronts publication here